]> New announcements feature!

2008-01-25T15:15:17Z 2008-01-28T10:50:01Z myExperiment now has a new Announcements feature that allows myExperiment admins to keep you informed on progress and other relevant news.^M You can subscribe to the <a href="http://www.myexperiment.org/announcements.rss">Announcements RSS feed</a> (and soon we will have email notifications).^M Don't forget to give us <a href="http://www.myexperiment.org/feedback">feedback</a>!

2007-11-15T09:00:44Z 2007-11-15T09:00:44Z

caArray Experiment data: Diffuse large B-cell lymphoma outcome prediction

2009-04-23T00:00:00Z

2009-04-23T17:51:56Z 2009-04-23T17:51:56Z

Taverna 1 2009-05-21T10:32:57Z 2010-04-23T12:56:44Z Taverna is an open source family of tools for designing and executing workflows, created by the myGrid project and funded by OMII UK, the EPSRC, BBRC, ESRC, JISC and Microsoft.The family consists of the Taverna Engine (the workhorse), and the Taverna Workbench (desktop client) and Taverna Server (remote workflow execution server) that sit on top of the Engine. See <a href="http://www.taverna.org.uk/">http://www.taverna.org.uk/</a> for further information.The Taverna 1 Workbench is an earlier version of the workbench which is still available for download. Taverna 1 workflow descriptions are produced and consumed by this version of the workbench. They are in an XML format also known as SCUFL.Note that the latest version of the workbench is Taverna 2 and is the recommended version. Most Taverna 1 workflows can also be read using the Taverna 2 workbench.Users of the Taverna 1 workbench can access myExperiment from the workbench using a ???plugin??? which can be downloaded within the workbench. The plugin allows users to browse, download and open workflows from myExperiment within Taverna. application/vnd.taverna.scufl+xml

pretty good...will retrieve any pathway image 2007-10-03T18:36:31Z

2007-11-06T17:10:16Z 2007-11-06T17:10:16Z

Don's unique tag experiment This is a test experiment where I will run the Unique Tags example workflow a few times. 2008-07-25T15:09:08Z 2008-07-25T15:09:08Z

2009-09-30T11:01:59Z

gaim-forum-users-helping-users.png

2008-02-10T01:56:29Z 2008-06-09T21:53:03Z Output from FLOSS Communication Centralization Workflow This example shows the communication dynamics in the Gaim project's "users helping users" forum. 489 172

2007-07-23T12:44:27Z

2007-07-24T16:02:00Z

2007-07-23T17:02:58Z 2008-09-17T09:53:02Z myExperiment This is the official group for the myExperiment team

Visit Paris to discuss WikiPedia Scholar with Segolene and Denis

2009-08-28T08:19:07Z 2009-08-28T08:19:07Z Hi, this coming Monday (31st of August) I will be in Paris to discuss with Segolene Ayme and Denis Costello about the WikiPedia Scholar project. The discussions will be based on the document uploaded to thsi group earlier. If anyone has points that seem to be missed in the document or discussions so far, can you please make them as comments to this group ?^M I will report about the meeting in this group as well. ^M Barend

Job_20080910-1323_Don Cruickshank

2008-09-10T13:24:38Z

2008-09-10T14:24:38Z

2008-09-10T14:25:40Z

COMPLETE

2009-01-30T14:45:14Z

--- query_protein: P53

2008-09-10T13:24:13Z 2009-01-30T14:45:14Z

2010-02-04T11:41:11Z 2010-02-04T11:41:11Z

2007-10-03T18:35:44Z

remember remember The 5th of November 2007-11-05T20:38:01Z

2007-12-11T18:01:14Z

Test pack This is a pack that will contain relationships. 2011-02-01T16:55:05Z 2011-02-01T16:55:05Z 10

2011-02-10T17:54:21Z

2007-10-03T18:36:31Z

Link the myGrid ontology 2008-07-12T08:35:01Z 2008-07-12T08:35:01Z chromosome

2007-11-07T19:13:23Z

aida runner aida runner

marco 2008-04-10T16:05:45Z 2008-12-03T11:20:58Z

2007-07-23T12:34:33Z 2010-05-24T14:22:43Z David R Newman Southampton United Kingdom

2010-05-24T14:07:31Z

2007-07-23T12:34:33Z

da39a3ee5e6b4b0d3255bfef95601890afd80709 University Research

Pathways and Gene annotations for QTL region This workflow searches for genes which reside in a QTL (Quantitative Trait Loci) region in the mouse, Mus musculus. The workflow requires an input of: a chromosome name or number; a QTL start base pair position; QTL end base pair position. Data is then extracted from BioMart to annotate each of the genes found in this region. The Entrez and UniProt identifiers are then sent to KEGG to obtain KEGG gene identifiers. The KEGG gene identifiers are then used to searcg for pathways in the KEGG pathway database.^M Example input:^M chromosome_name: 17^M start_position: 28500000^M end_position: 32500000

2009-11-19T18:18:52Z 2009-11-20T10:33:25Z pathways_and_gene_annotations_forqtl_region_740037.xml

5457 1867

Pathways and Gene annotations for QTL Phenotype This workflow searches for genes which reside in a QTL (Quantitative Trait Loci) region in the mouse, Mus musculus. The workflow requires an input of: a chromosome name or number; a QTL start base pair position; QTL end base pair position. Data is then extracted from BioMart to annotate each of the genes found in this region. The Entrez and UniProt identifiers are then sent to KEGG to obtain KEGG gene identifiers. The KEGG gene identifiers are then used to searcg for pathways in the KEGG pathway database.

2007-10-03T18:36:02Z 2007-10-03T18:36:02Z pathways_and_gene_annotations_for_qtl_phenotype_25941.xml